Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Vps54Q5SPW0 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm24069-201ENSMUST00000104512 127 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm13604-201ENSMUST00000119332 482 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm4911-201ENSMUST00000119388 945 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm11545-201ENSMUST00000146507 375 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm25057-201ENSMUST00000157366 88 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm2225-201ENSMUST00000209570 377 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm15732-201ENSMUST00000079794 480 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps54Q5SPW0 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm11609-201ENSMUST00000121926 793 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm26162-201ENSMUST00000157793 132 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm25025-201ENSMUST00000175018 111 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm22132-201ENSMUST00000175316 100 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm27853-201ENSMUST00000184176 250 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm18805-201ENSMUST00000206872 655 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm9321-201ENSMUST00000221179 778 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 AC137950.3-201ENSMUST00000228250 246 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Vps54Q5SPW0 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm22223-201ENSMUST00000157360 125 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm26455-201ENSMUST00000175300 92 ntBASIC7.78□□□□□ -1.16
Vps54Q5SPW0 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms