Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Gm13081-201ENSMUST00000121527 5599 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm25795-201ENSMUST00000104421 132 ntBASIC7.11□□□□□ -1.27
NcanP55066 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Gm13245-201ENSMUST00000119646 260 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm16248-201ENSMUST00000124238 243 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.11□□□□□ -1.27
NcanP55066 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC7.11□□□□□ -1.27
NcanP55066 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Gm15838-201ENSMUST00000161575 180 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
NcanP55066 Gm20691-201ENSMUST00000176889 333 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm19560-201ENSMUST00000177510 514 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm7825-201ENSMUST00000204046 416 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm33601-201ENSMUST00000210001 961 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.11□□□□□ -1.27
NcanP55066 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.11□□□□□ -1.27
NcanP55066 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
NcanP55066 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.11□□□□□ -1.27
NcanP55066 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Gm10744-201ENSMUST00000220184 2706 ntBASIC7.11□□□□□ -1.27
NcanP55066 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.11□□□□□ -1.27
NcanP55066 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
NcanP55066 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NcanP55066 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.1□□□□□ -1.27
NcanP55066 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NcanP55066 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.1□□□□□ -1.27
NcanP55066 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.1□□□□□ -1.27
NcanP55066 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
NcanP55066 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NcanP55066 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NcanP55066 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.1□□□□□ -1.27
NcanP55066 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.1□□□□□ -1.27
NcanP55066 Gm25178-201ENSMUST00000122633 325 ntBASIC7.1□□□□□ -1.27
NcanP55066 Gm23884-201ENSMUST00000122687 294 ntBASIC7.1□□□□□ -1.27
NcanP55066 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC7.1□□□□□ -1.27
NcanP55066 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.1□□□□□ -1.27
NcanP55066 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm22355-201ENSMUST00000175531 96 ntBASIC7.1□□□□□ -1.27
NcanP55066 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NcanP55066 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.1□□□□□ -1.27
NcanP55066 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.1□□□□□ -1.27
NcanP55066 AC132384.8-201ENSMUST00000218152 1204 ntBASIC7.1□□□□□ -1.27
NcanP55066 Gm7768-201ENSMUST00000222988 597 ntBASIC7.1□□□□□ -1.27
NcanP55066 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.1□□□□□ -1.27
NcanP55066 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.1□□□□□ -1.27
NcanP55066 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.1□□□□□ -1.27
NcanP55066 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.1□□□□□ -1.27
NcanP55066 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NcanP55066 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC7.1□□□□□ -1.27
NcanP55066 Gm15011-201ENSMUST00000117724 1480 ntBASIC7.1□□□□□ -1.27
NcanP55066 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.1□□□□□ -1.27
NcanP55066 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NcanP55066 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms