Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Gm14300-201ENSMUST00000120800 946 ntBASIC8.38□□□□□ -1.07
Msh6P54276 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Gm26381-201ENSMUST00000174895 92 ntBASIC8.38□□□□□ -1.07
Msh6P54276 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Msh6P54276 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Gm37463-201ENSMUST00000193819 796 ntBASIC8.38□□□□□ -1.07
Msh6P54276 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Gm42799-201ENSMUST00000201331 328 ntBASIC8.38□□□□□ -1.07
Msh6P54276 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.38□□□□□ -1.07
Msh6P54276 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Msh6P54276 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Msh6P54276 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Msh6P54276 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm8534-201ENSMUST00000118553 766 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm11533-201ENSMUST00000120287 477 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm13430-201ENSMUST00000121366 288 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm26023-201ENSMUST00000122722 313 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Gm26037-201ENSMUST00000158150 311 ntBASIC8.37□□□□□ -1.07
Msh6P54276 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 Gm28665-201ENSMUST00000189269 670 ntBASIC8.37□□□□□ -1.07
Msh6P54276 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm18805-201ENSMUST00000206872 655 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm18467-201ENSMUST00000208805 434 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm18781-201ENSMUST00000211252 924 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Gm18103-201ENSMUST00000216621 779 ntBASIC8.37□□□□□ -1.07
Msh6P54276 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.37□□□□□ -1.07
Msh6P54276 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.37□□□□□ -1.07
Msh6P54276 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Msh6P54276 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Msh6P54276 Gm12099-201ENSMUST00000118660 750 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.36□□□□□ -1.07
Msh6P54276 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Mir5107-201ENSMUST00000175586 88 ntBASIC8.36□□□□□ -1.07
Msh6P54276 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Gm8506-201ENSMUST00000186661 829 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Gm9517-201ENSMUST00000195021 874 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Gm42753-201ENSMUST00000196718 1268 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.36□□□□□ -1.07
Msh6P54276 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Msh6P54276 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Zfp850-201ENSMUST00000099111 941 ntBASIC8.36□□□□□ -1.07
Msh6P54276 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Msh6P54276 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.36□□□□□ -1.07
Msh6P54276 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Msh6P54276 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Msh6P54276 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Msh6P54276 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.36□□□□□ -1.07
Msh6P54276 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.36□□□□□ -1.07
Msh6P54276 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Msh6P54276 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Msh6P54276 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.35□□□□□ -1.07
Msh6P54276 Gm20401-201ENSMUST00000173717 212 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms