Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Sdc1P18828 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sdc1P18828 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm14513-201ENSMUST00000117403 123 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm13325-201ENSMUST00000118746 806 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm12034-201ENSMUST00000119032 399 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm12115-201ENSMUST00000119969 447 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm14515-201ENSMUST00000121327 216 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 BC064078-201ENSMUST00000122939 570 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm23117-201ENSMUST00000158482 108 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm17511-201ENSMUST00000172206 342 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm27001-201ENSMUST00000182252 936 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm27193-201ENSMUST00000184217 586 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm43689-201ENSMUST00000195951 427 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm6850-201ENSMUST00000210031 530 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm7151-201ENSMUST00000211511 954 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm19217-201ENSMUST00000218238 328 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm18362-201ENSMUST00000221786 529 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gnpnat1-202ENSMUST00000226276 710 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Gm16391-201ENSMUST00000086601 447 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sdc1P18828 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.24□□□□□ -1.57
Sdc1P18828 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sdc1P18828 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sdc1P18828 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm17170-201ENSMUST00000112785 316 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm15105-201ENSMUST00000117777 204 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm12040-201ENSMUST00000118357 537 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm12813-201ENSMUST00000119615 902 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm4234-201ENSMUST00000119747 714 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm7700-201ENSMUST00000120273 970 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm12642-201ENSMUST00000121098 876 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm14038-201ENSMUST00000121500 807 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm11434-201ENSMUST00000122379 629 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.23□□□□□ -1.57
Sdc1P18828 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.23□□□□□ -1.57
Sdc1P18828 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm25574-201ENSMUST00000175245 249 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC5.23□□□□□ -1.57
Sdc1P18828 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Mir6367-201ENSMUST00000183385 102 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm5261-201ENSMUST00000185860 713 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm21301-201ENSMUST00000189476 699 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm28239-201ENSMUST00000190225 447 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm37724-201ENSMUST00000195240 1221 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm17994-201ENSMUST00000209260 533 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.23□□□□□ -1.57
Sdc1P18828 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms