Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm16276-201ENSMUST00000131218 262 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm28934-201ENSMUST00000186491 346 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm7570-201ENSMUST00000215246 698 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm3266-201ENSMUST00000217832 591 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm16335-201ENSMUST00000077495 309 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Gm25587-201ENSMUST00000082498 166 ntBASIC5.94□□□□□ -1.46
Col6a6Q8C6K9 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm43681-201ENSMUST00000201581 1903 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm3943-201ENSMUST00000118606 718 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm12618-201ENSMUST00000121754 483 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm22523-201ENSMUST00000158696 100 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm25065-201ENSMUST00000177914 132 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm25891-201ENSMUST00000180050 132 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm21392-201ENSMUST00000182950 972 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm28883-201ENSMUST00000189256 369 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm19231-201ENSMUST00000193212 830 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm44902-201ENSMUST00000206177 805 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm18467-201ENSMUST00000208805 434 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm15575-201ENSMUST00000119414 1581 ntBASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a6Q8C6K9 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm7146-201ENSMUST00000116079 739 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm13455-201ENSMUST00000118767 517 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm28413-201ENSMUST00000189369 291 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms