Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm23897-201ENSMUST00000158110 158 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm23187-201ENSMUST00000175746 86 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm6472-201ENSMUST00000178147 651 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm21171-201ENSMUST00000180048 673 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm9423-201ENSMUST00000183173 997 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm27186-201ENSMUST00000184223 307 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm6366-201ENSMUST00000198766 826 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm29817-201ENSMUST00000210098 172 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm25926-201ENSMUST00000082899 160 ntBASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim47Q8C0E3 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm6142-201ENSMUST00000120290 325 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm12402-201ENSMUST00000120536 334 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm25780-201ENSMUST00000122528 253 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Mir1983-201ENSMUST00000157523 132 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm17973-201ENSMUST00000174509 520 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Mir5100-201ENSMUST00000174993 64 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm27542-201ENSMUST00000184184 256 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm19057-201ENSMUST00000194329 1197 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 AC174678.3-201ENSMUST00000227568 362 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim47Q8C0E3 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms