Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Pde4b-205ENSMUST00000106904 2430 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Rtel1-204ENSMUST00000108814 4322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Hmgcr-209ENSMUST00000170287 2981 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Sla2-201ENSMUST00000029164 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 2810407A14Rik-202ENSMUST00000189929 2172 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Cst6-201ENSMUST00000025764 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Mindy4b-ps-202ENSMUST00000191233 1374 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Rpa1-202ENSMUST00000092907 5077 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm23941-201ENSMUST00000101953 107 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Ccl19-201ENSMUST00000102957 745 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trim35Q8C006 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm12137-201ENSMUST00000119565 346 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm25426-201ENSMUST00000157606 170 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm22212-201ENSMUST00000158096 106 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Rit1-207ENSMUST00000172252 820 ntTSL 3 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm17069-201ENSMUST00000172256 490 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm23162-201ENSMUST00000175081 121 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm20630-201ENSMUST00000177387 551 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Igkv4-62-201ENSMUST00000177795 288 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm27605-201ENSMUST00000184648 136 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm29718-201ENSMUST00000193396 477 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Ighv5-10-201ENSMUST00000194591 252 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm32591-201ENSMUST00000203038 414 ntTSL 3 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm44166-201ENSMUST00000204070 515 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm45678-201ENSMUST00000210509 295 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm45628-201ENSMUST00000210849 274 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm7368-201ENSMUST00000213307 367 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Endov-201ENSMUST00000064513 954 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm23459-201ENSMUST00000083259 131 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Pfkfb2-213ENSMUST00000191347 1759 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Kpna7-201ENSMUST00000110672 2262 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Zswim3-201ENSMUST00000052107 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC9.41□□□□□ -0.9
Trim35Q8C006 Fam169a-201ENSMUST00000042517 4547 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Itih1-202ENSMUST00000163118 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Spire1-207ENSMUST00000224799 2059 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Ces2c-201ENSMUST00000055052 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim35Q8C006 Gm9408-201ENSMUST00000197375 1505 ntBASIC9.41□□□□□ -0.9
Trim35Q8C006 AC160550.2-202ENSMUST00000227812 1861 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Samd3-201ENSMUST00000060716 1874 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Wdr3-201ENSMUST00000052120 3432 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Smok2a-201ENSMUST00000080647 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm36298-201ENSMUST00000223394 1732 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Xlr4b-202ENSMUST00000069103 1304 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm37210-201ENSMUST00000192484 2004 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm7129-201ENSMUST00000117402 997 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm4853-201ENSMUST00000119359 394 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm12804-201ENSMUST00000121030 999 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm12161-201ENSMUST00000121454 361 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm25178-201ENSMUST00000122633 325 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms