Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm21524-201ENSMUST00000190499 696 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm21715-201ENSMUST00000191056 694 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm3544-201ENSMUST00000196129 305 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm5708-201ENSMUST00000196289 886 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm36262-201ENSMUST00000223274 499 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm11545-201ENSMUST00000146507 375 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm25057-201ENSMUST00000157366 88 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm23071-201ENSMUST00000158242 115 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm29778-201ENSMUST00000201667 466 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm5318-201ENSMUST00000205249 406 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm10688-201ENSMUST00000214985 520 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm8863-201ENSMUST00000216630 926 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.64□□□□□ -1.19
Nup98Q6PFD9 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm11848-201ENSMUST00000121207 973 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm25133-201ENSMUST00000082647 130 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm24200-201ENSMUST00000082955 157 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Nup98Q6PFD9 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gm12874-201ENSMUST00000117190 913 ntBASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gm7931-201ENSMUST00000121537 271 ntBASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Mir6952-201ENSMUST00000185092 61 ntBASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
Nup98Q6PFD9 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms