Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm19185-201ENSMUST00000196365 643 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm34144-201ENSMUST00000197039 259 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm44837-201ENSMUST00000206863 717 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm18899-201ENSMUST00000217663 546 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm7252-201ENSMUST00000223284 456 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 AC154252.1-201ENSMUST00000226041 473 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm25587-201ENSMUST00000082498 166 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.81□□□□□ -1.32
Sp140Q6NSQ5 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm24473-201ENSMUST00000104483 131 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm13877-201ENSMUST00000120614 417 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm2976-201ENSMUST00000160362 513 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm7418-201ENSMUST00000162120 801 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm21392-201ENSMUST00000182950 972 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm28114-201ENSMUST00000187232 379 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm44112-201ENSMUST00000204787 372 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Mir296-201ENSMUST00000083587 79 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm5446-201ENSMUST00000091762 784 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sp140Q6NSQ5 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sp140Q6NSQ5 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms