Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm18127-201ENSMUST00000208479 725 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm2961-201ENSMUST00000211074 772 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 AC069562.1-201ENSMUST00000224206 434 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 CT571256.1-201ENSMUST00000226045 585 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Olfr654-201ENSMUST00000098173 1155 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 AC122426.1-201ENSMUST00000214736 2235 ntBASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim41Q5NCC3 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm6142-201ENSMUST00000120290 325 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm11341-201ENSMUST00000122316 447 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Mir7j-201ENSMUST00000184427 122 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm38041-201ENSMUST00000194445 661 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm44940-201ENSMUST00000206225 1247 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm19182-201ENSMUST00000207139 577 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 AC123920.1-201ENSMUST00000221449 384 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 AC154573.2-201ENSMUST00000224174 378 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 AC124572.1-201ENSMUST00000218155 2406 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm16072-201ENSMUST00000119574 2377 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Gm44007-201ENSMUST00000203845 2189 ntBASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim41Q5NCC3 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Pramel-201ENSMUST00000118979 1383 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm36938-201ENSMUST00000191612 2696 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Defa-ps7-201ENSMUST00000117139 168 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm8916-201ENSMUST00000119732 949 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm14380-201ENSMUST00000122298 431 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm22390-201ENSMUST00000157588 325 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm21614-201ENSMUST00000183260 1005 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm8241-201ENSMUST00000189286 816 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms