Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm5694-201ENSMUST00000195648 641 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm2602-201ENSMUST00000202112 571 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm45122-201ENSMUST00000206376 784 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm5324-201ENSMUST00000208115 476 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm19340-201ENSMUST00000221995 345 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Nkx3-1P97436 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm23311-201ENSMUST00000104152 134 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm15765-201ENSMUST00000118407 910 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm13642-201ENSMUST00000121697 381 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm23891-201ENSMUST00000158114 138 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm20432-201ENSMUST00000173716 250 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm37901-201ENSMUST00000195107 514 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm4083-201ENSMUST00000207158 451 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm18914-201ENSMUST00000214625 616 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm5512-202ENSMUST00000220222 1522 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms