Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
Nphp4P59240 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm7048-201ENSMUST00000199395 1891 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Nphp4P59240 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Nphp4P59240 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm23894-201ENSMUST00000158107 313 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm15257-201ENSMUST00000177680 883 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Gm15252-201ENSMUST00000177750 883 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Gm15256-201ENSMUST00000177793 883 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm15260-201ENSMUST00000179402 883 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm6119-201ENSMUST00000193443 1206 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.86□□□□□ -0.99
Nphp4P59240 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.86□□□□□ -0.99
Nphp4P59240 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.86□□□□□ -0.99
Nphp4P59240 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm12937-201ENSMUST00000118333 448 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 Gm8855-201ENSMUST00000118888 878 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm7626-201ENSMUST00000195801 353 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Gm44360-201ENSMUST00000200081 82 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 AC114572.1-201ENSMUST00000227262 300 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.85□□□□□ -0.99
Nphp4P59240 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Nphp4P59240 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nphp4P59240 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Nphp4P59240 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Nphp4P59240 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Gm11545-201ENSMUST00000146507 375 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Gm16557-201ENSMUST00000159182 191 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Gm16269-201ENSMUST00000160532 409 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC8.84□□□□□ -0.99
Nphp4P59240 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Gm8454-201ENSMUST00000196980 811 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Gm18290-201ENSMUST00000202900 844 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Gm45473-201ENSMUST00000211452 616 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Nphp4P59240 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.84□□□□□ -0.99
Nphp4P59240 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Nphp4P59240 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Nphp4P59240 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Nphp4P59240 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms