Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
NcanP55066 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.13□□□□□ -1.27
NcanP55066 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.13□□□□□ -1.27
NcanP55066 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Gm15149-201ENSMUST00000119370 360 ntBASIC7.13□□□□□ -1.27
NcanP55066 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.13□□□□□ -1.27
NcanP55066 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Gm22599-201ENSMUST00000157597 132 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm25717-201ENSMUST00000158631 353 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.13□□□□□ -1.27
NcanP55066 Mir5107-201ENSMUST00000175586 88 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm6472-201ENSMUST00000178147 651 ntBASIC7.13□□□□□ -1.27
NcanP55066 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm8480-201ENSMUST00000190350 698 ntBASIC7.13□□□□□ -1.27
NcanP55066 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.13□□□□□ -1.27
NcanP55066 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm46364-201ENSMUST00000218548 319 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm9118-201ENSMUST00000219246 754 ntBASIC7.13□□□□□ -1.27
NcanP55066 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NcanP55066 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.13□□□□□ -1.27
NcanP55066 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NcanP55066 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
NcanP55066 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC7.13□□□□□ -1.27
NcanP55066 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
NcanP55066 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NcanP55066 Gm24230-201ENSMUST00000104313 129 ntBASIC7.12□□□□□ -1.27
NcanP55066 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Gm26950-201ENSMUST00000182734 498 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm27152-201ENSMUST00000183828 99 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm18849-201ENSMUST00000189861 560 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm8009-201ENSMUST00000191672 436 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm20203-201ENSMUST00000192352 332 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm6631-201ENSMUST00000193699 559 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm45122-201ENSMUST00000206376 784 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm45782-201ENSMUST00000212670 366 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.12□□□□□ -1.27
NcanP55066 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.12□□□□□ -1.27
NcanP55066 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.12□□□□□ -1.27
NcanP55066 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.12□□□□□ -1.27
NcanP55066 Gm23330-201ENSMUST00000082660 164 ntBASIC7.12□□□□□ -1.27
NcanP55066 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
NcanP55066 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.12□□□□□ -1.27
NcanP55066 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.12□□□□□ -1.27
NcanP55066 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NcanP55066 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.11□□□□□ -1.27
NcanP55066 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
NcanP55066 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.11□□□□□ -1.27
NcanP55066 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.11□□□□□ -1.27
NcanP55066 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NcanP55066 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.11□□□□□ -1.27
NcanP55066 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NcanP55066 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms