Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox3P53784 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox3P53784 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 Gm11833-201ENSMUST00000118393 853 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm12099-201ENSMUST00000118660 750 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm13438-201ENSMUST00000120100 573 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Gm26211-201ENSMUST00000158578 129 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Gm29784-201ENSMUST00000196217 406 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm43382-201ENSMUST00000198954 838 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Gm31861-201ENSMUST00000204563 672 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Sox3P53784 Gm44163-201ENSMUST00000205140 475 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Sox3P53784 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.4□□□□□ -1.38
Sox3P53784 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox3P53784 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.4□□□□□ -1.38
Sox3P53784 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox3P53784 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.4□□□□□ -1.39
Sox3P53784 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.4□□□□□ -1.39
Sox3P53784 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox3P53784 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox3P53784 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Sox3P53784 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Sox3P53784 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox3P53784 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sox3P53784 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox3P53784 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox3P53784 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.39□□□□□ -1.39
Sox3P53784 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Sox3P53784 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm14865-201ENSMUST00000117523 494 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm4992-201ENSMUST00000120256 768 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm14070-201ENSMUST00000120773 428 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm2986-201ENSMUST00000121603 382 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm13642-201ENSMUST00000121697 381 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm15242-201ENSMUST00000122459 283 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Mir1907-201ENSMUST00000122509 90 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm9428-201ENSMUST00000127214 769 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox3P53784 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Gm23968-201ENSMUST00000175047 125 ntBASIC6.39□□□□□ -1.39
Sox3P53784 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.39□□□□□ -1.39
Sox3P53784 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm5154-201ENSMUST00000203971 399 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Gm43905-201ENSMUST00000204516 204 ntBASIC6.39□□□□□ -1.39
Sox3P53784 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm3678-201ENSMUST00000218888 492 ntBASIC6.39□□□□□ -1.39
Sox3P53784 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.39□□□□□ -1.39
Sox3P53784 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.39□□□□□ -1.39
Sox3P53784 CT009515.3-201ENSMUST00000226509 671 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox3P53784 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox3P53784 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox3P53784 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Sox3P53784 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.39□□□□□ -1.39
Sox3P53784 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms