Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Shmt1P50431 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Shmt1P50431 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Shmt1P50431 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Shmt1P50431 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Shmt1P50431 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm24473-201ENSMUST00000104483 131 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm13137-201ENSMUST00000118035 345 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm12242-201ENSMUST00000118824 738 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm6654-201ENSMUST00000118950 348 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm11796-201ENSMUST00000120208 972 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm22523-201ENSMUST00000158696 100 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm20432-201ENSMUST00000173716 250 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm22990-201ENSMUST00000175427 89 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm27507-201ENSMUST00000184199 93 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.17□□□□□ -1.26
Shmt1P50431 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm28428-201ENSMUST00000188886 697 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm17937-201ENSMUST00000197908 742 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm44137-201ENSMUST00000203670 367 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm9367-201ENSMUST00000205703 546 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm44603-201ENSMUST00000206820 367 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm44585-201ENSMUST00000207150 607 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm18242-201ENSMUST00000218455 542 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Gm5080-201ENSMUST00000220341 743 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 AC140368.1-202ENSMUST00000226131 658 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm24621-201ENSMUST00000082679 140 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Mir425-201ENSMUST00000083645 85 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Shmt1P50431 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Shmt1P50431 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.17□□□□□ -1.26
Shmt1P50431 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.17□□□□□ -1.26
Shmt1P50431 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Shmt1P50431 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
Shmt1P50431 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
Shmt1P50431 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm13983-201ENSMUST00000118018 865 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm8312-201ENSMUST00000119380 618 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm12757-201ENSMUST00000119465 800 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Shmt1P50431 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm8722-201ENSMUST00000121466 769 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm29516-201ENSMUST00000190402 468 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm7804-202ENSMUST00000194187 854 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.16□□□□□ -1.26
Shmt1P50431 Gm43048-201ENSMUST00000196101 388 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 Gm9504-201ENSMUST00000196322 468 ntBASIC7.16□□□□□ -1.26
Shmt1P50431 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms