Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col2a1P28481 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm14900-201ENSMUST00000120304 733 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm15300-201ENSMUST00000122324 279 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm22655-201ENSMUST00000174949 96 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm7266-201ENSMUST00000187999 405 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm3266-201ENSMUST00000217832 591 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Col2a1P28481 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Col2a1P28481 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col2a1P28481 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm25795-201ENSMUST00000104421 132 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm12937-201ENSMUST00000118333 448 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm14580-201ENSMUST00000119122 718 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 Gm16269-201ENSMUST00000160532 409 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm7626-201ENSMUST00000195801 353 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm30708-201ENSMUST00000202183 312 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.43□□□□□ -1.22
Col2a1P28481 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col2a1P28481 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.43□□□□□ -1.22
Col2a1P28481 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Col2a1P28481 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col2a1P28481 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm24434-201ENSMUST00000104081 132 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm11545-201ENSMUST00000146507 375 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm24179-201ENSMUST00000158925 127 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm37103-201ENSMUST00000191830 115 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm37758-201ENSMUST00000194275 629 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm37072-201ENSMUST00000194570 837 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms