Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm23007-201ENSMUST00000158951 177 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Gm23018-201ENSMUST00000177928 109 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Mir6921-201ENSMUST00000183719 80 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm7369-201ENSMUST00000192738 936 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.57□□□□□ -1.36
Lire1P11260 Gm2142-201ENSMUST00000197899 589 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.57□□□□□ -1.36
Lire1P11260 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Lire1P11260 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC6.57□□□□□ -1.36
Lire1P11260 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm45100-201ENSMUST00000209153 391 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm45446-201ENSMUST00000209348 216 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm45725-201ENSMUST00000212962 337 ntBASIC6.57□□□□□ -1.36
Lire1P11260 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.57□□□□□ -1.36
Lire1P11260 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm2099-201ENSMUST00000220979 412 ntBASIC6.57□□□□□ -1.36
Lire1P11260 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.57□□□□□ -1.36
Lire1P11260 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.57□□□□□ -1.36
Lire1P11260 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Lire1P11260 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Lire1P11260 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Lire1P11260 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Lire1P11260 Gm12635-201ENSMUST00000117285 752 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm11263-201ENSMUST00000121853 749 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.56□□□□□ -1.36
Lire1P11260 Gm25660-201ENSMUST00000158470 104 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Lire1P11260 Gm22254-201ENSMUST00000179186 110 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm6472-202ENSMUST00000187973 582 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm37225-201ENSMUST00000193423 325 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm43147-201ENSMUST00000196944 542 ntBASIC6.56□□□□□ -1.36
Lire1P11260 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm18995-201ENSMUST00000202981 520 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 Gm7419-201ENSMUST00000209962 925 ntBASIC6.56□□□□□ -1.36
Lire1P11260 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.56□□□□□ -1.36
Lire1P11260 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Lire1P11260 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Lire1P11260 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Lire1P11260 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Lire1P11260 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Lire1P11260 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Lire1P11260 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Lire1P11260 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms