Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Gm5120-201ENSMUST00000215231 2414 ntBASIC6.44□□□□□ -1.38
Hoxd3P09027 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.44□□□□□ -1.38
Hoxd3P09027 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxd3P09027 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm26628-201ENSMUST00000181028 1719 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm23692-201ENSMUST00000101881 160 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm16394-201ENSMUST00000117289 675 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm6275-201ENSMUST00000118971 1122 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm12034-201ENSMUST00000119032 399 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm12900-201ENSMUST00000120919 573 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm11965-201ENSMUST00000122017 277 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm13673-201ENSMUST00000122056 531 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm26255-201ENSMUST00000122492 103 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm16008-201ENSMUST00000126009 810 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Defa-ps3-201ENSMUST00000142705 282 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm5977-201ENSMUST00000174304 573 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm6900-201ENSMUST00000178971 342 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Mir6239-201ENSMUST00000183564 105 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm27796-201ENSMUST00000183863 261 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm9142-201ENSMUST00000187161 955 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29556-201ENSMUST00000187591 696 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29041-201ENSMUST00000189199 380 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm20128-201ENSMUST00000196189 417 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm18340-201ENSMUST00000196342 609 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm21006-201ENSMUST00000196930 667 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm45674-201ENSMUST00000210043 450 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 Gm29807-201ENSMUST00000220161 372 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 CT033774.2-201ENSMUST00000222079 256 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxd3P09027 AC154328.1-201ENSMUST00000225875 307 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 AC207128.1-201ENSMUST00000225928 799 ntBASIC6.43□□□□□ -1.38
Hoxd3P09027 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms