Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm43181-201ENSMUST00000197001 2072 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm11624-201ENSMUST00000118579 1041 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm15801-201ENSMUST00000120920 522 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm8783-201ENSMUST00000159764 522 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm37770-201ENSMUST00000192855 772 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm17997-201ENSMUST00000211801 840 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm5582-201ENSMUST00000075251 522 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Gm43982-201ENSMUST00000204995 1829 ntBASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc180J3QNE4 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm23910-201ENSMUST00000104597 132 ntBASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm5692-201ENSMUST00000187254 1057 ntBASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm43098-201ENSMUST00000199989 1297 ntBASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm18290-201ENSMUST00000202900 844 ntBASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm36527-201ENSMUST00000195500 3029 ntBASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc180J3QNE4 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm13207-201ENSMUST00000119862 773 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm6119-201ENSMUST00000193443 1206 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm37758-201ENSMUST00000194275 629 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 AC119894.1-201ENSMUST00000220399 350 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Snora44-201ENSMUST00000082670 129 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm43398-201ENSMUST00000196584 2742 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 CT010577.1-202ENSMUST00000226187 1903 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm6011-201ENSMUST00000211736 1796 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc180J3QNE4 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 AC107453.1-201ENSMUST00000227490 3268 ntBASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 AC158388.2-201ENSMUST00000223665 1314 ntBASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc180J3QNE4 Gm14158-201ENSMUST00000118409 308 ntBASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Gm12618-201ENSMUST00000121754 483 ntBASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Mir6952-201ENSMUST00000185092 61 ntBASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Trav3n-2-201ENSMUST00000197693 334 ntBASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Trav3d-2-201ENSMUST00000199874 334 ntBASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms