Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm15216-201ENSMUST00000118058 277 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm5793-201ENSMUST00000119393 630 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm5809-201ENSMUST00000121854 529 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm26410-201ENSMUST00000157670 261 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm25387-201ENSMUST00000157813 132 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm23276-201ENSMUST00000157913 138 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm26729-201ENSMUST00000180744 352 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm26557-201ENSMUST00000180756 493 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm27210-201ENSMUST00000184263 402 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Mir7674-201ENSMUST00000184964 63 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm28527-201ENSMUST00000185210 297 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm28952-201ENSMUST00000189285 681 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm19891-201ENSMUST00000189771 303 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm21524-201ENSMUST00000190499 696 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm21715-201ENSMUST00000191056 694 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm38022-201ENSMUST00000191762 403 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm5711-201ENSMUST00000197896 421 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 CT009742.1-201ENSMUST00000222507 702 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm22053-201ENSMUST00000083394 200 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm10221-201ENSMUST00000088299 309 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC5.88□□□□□ -1.47
Scrt1Q99M85 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Scrt1Q99M85 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm43497-201ENSMUST00000201137 2316 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.87□□□□□ -1.47
Scrt1Q99M85 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms