Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm15227-201ENSMUST00000121844 399 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm23810-201ENSMUST00000175150 74 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm42857-201ENSMUST00000200823 339 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm2602-201ENSMUST00000202112 571 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm4556-201ENSMUST00000217808 355 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm6575-201ENSMUST00000222946 697 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm5087-204ENSMUST00000225820 645 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm24621-201ENSMUST00000082679 140 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.74□□□□□ -1.01
RtcbQ99LF4 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RtcbQ99LF4 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm24790-201ENSMUST00000104285 132 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 n-R5s16-201ENSMUST00000104555 119 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm8321-201ENSMUST00000181691 980 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm31306-201ENSMUST00000197517 508 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm42673-201ENSMUST00000202676 337 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm44181-201ENSMUST00000203106 483 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm19340-201ENSMUST00000221995 345 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 CT009742.1-201ENSMUST00000222507 702 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 AC099612.2-201ENSMUST00000226824 721 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 AW822073-201ENSMUST00000075305 555 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.73□□□□□ -1.01
RtcbQ99LF4 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
RtcbQ99LF4 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms