Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm43906-201ENSMUST00000203194 906 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 CT030194.1-201ENSMUST00000225507 532 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Brf1Q8CFK2 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm7821-201ENSMUST00000117111 788 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm15750-201ENSMUST00000120970 616 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm5871-201ENSMUST00000176461 718 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm9274-201ENSMUST00000182505 984 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Mir6337-201ENSMUST00000184194 105 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm27970-201ENSMUST00000184854 407 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm37871-201ENSMUST00000194973 688 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm18330-201ENSMUST00000199246 547 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm8190-201ENSMUST00000199603 586 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm18838-201ENSMUST00000204855 886 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.97□□□□□ -1.13
Brf1Q8CFK2 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.97□□□□□ -1.13
Brf1Q8CFK2 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.96□□□□□ -1.13
Brf1Q8CFK2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Brf1Q8CFK2 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Brf1Q8CFK2 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Brf1Q8CFK2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm24790-201ENSMUST00000104285 132 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm5601-201ENSMUST00000118909 972 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm15530-201ENSMUST00000122206 555 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm8089-201ENSMUST00000122463 968 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm7452-201ENSMUST00000200764 788 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm44265-201ENSMUST00000203631 465 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm8479-201ENSMUST00000203825 718 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm44856-201ENSMUST00000206639 304 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm17917-201ENSMUST00000218561 953 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Brf1Q8CFK2 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms