Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm4042-201ENSMUST00000216946 637 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Nup88Q8CEC0 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm23768-201ENSMUST00000104440 131 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm11445-201ENSMUST00000119101 532 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm12369-201ENSMUST00000121343 942 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm12451-201ENSMUST00000121636 633 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Nup88Q8CEC0 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Thap6-201ENSMUST00000191860 3151 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm8534-201ENSMUST00000118553 766 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm13669-201ENSMUST00000122366 457 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm18012-201ENSMUST00000204558 773 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm18040-201ENSMUST00000217922 827 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.78□□□□□ -1.16
Nup88Q8CEC0 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Nup88Q8CEC0 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Nup88Q8CEC0 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Nup88Q8CEC0 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.77□□□□□ -1.16
Nup88Q8CEC0 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Nup88Q8CEC0 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm38082-201ENSMUST00000192800 6882 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm13222-201ENSMUST00000119638 138 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm13237-201ENSMUST00000122151 635 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms