Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC7.94□□□□□ -1.14
Pcdhb7Q8CDY9 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 AC120163.1-201ENSMUST00000228618 1680 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm25762-201ENSMUST00000103984 132 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm27905-201ENSMUST00000184005 207 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29651-201ENSMUST00000189088 697 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29144-201ENSMUST00000189235 339 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29238-201ENSMUST00000189709 695 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm28607-201ENSMUST00000190142 339 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm20802-201ENSMUST00000190832 698 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm28121-201ENSMUST00000191420 339 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm38135-201ENSMUST00000195068 502 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm38328-201ENSMUST00000195582 317 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm43171-201ENSMUST00000199882 291 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm44221-201ENSMUST00000203552 388 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm31861-201ENSMUST00000204563 672 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm8748-201ENSMUST00000211125 587 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm18030-201ENSMUST00000222163 731 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 AC154249.1-201ENSMUST00000226296 320 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 AC170188.1-201ENSMUST00000223710 1963 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Pcdhb7Q8CDY9 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Gm37959-201ENSMUST00000191700 2897 ntBASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC7.92□□□□□ -1.14
Pcdhb7Q8CDY9 Mir467f-201ENSMUST00000116923 120 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms