Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm17868-201ENSMUST00000192761 668 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm38185-201ENSMUST00000193195 694 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm37261-201ENSMUST00000194360 1101 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm7407-201ENSMUST00000208301 568 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm45395-201ENSMUST00000209891 559 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm18924-201ENSMUST00000211929 316 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm18541-201ENSMUST00000215935 538 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm18016-201ENSMUST00000216119 801 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm8672-201ENSMUST00000221200 332 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trim35Q8C006 1700109K24Rik-202ENSMUST00000227532 1030 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Clec2j-201ENSMUST00000032517 515 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Mageb1-201ENSMUST00000072269 1143 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm4889-201ENSMUST00000075321 444 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm22982-201ENSMUST00000082613 319 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Mageb1-202ENSMUST00000099471 993 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Armc9-202ENSMUST00000113309 3555 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Aldh18a1-201ENSMUST00000025979 3527 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm44848-201ENSMUST00000207808 3234 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Slc30a2-204ENSMUST00000105874 3153 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Cnga2-201ENSMUST00000006020 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Spdl1-201ENSMUST00000093191 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm44437-201ENSMUST00000203832 4038 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 E330012B07Rik-202ENSMUST00000151979 2349 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Cyp2b9-201ENSMUST00000082214 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Olfr1395-203ENSMUST00000214195 2984 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 BC039771-202ENSMUST00000144661 2753 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Sh3rf1-202ENSMUST00000209611 4416 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm20345-201ENSMUST00000175839 2414 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm46404-201ENSMUST00000221461 4114 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Spata32-201ENSMUST00000103076 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm26288-201ENSMUST00000104168 132 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm23836-201ENSMUST00000104434 129 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm5255-201ENSMUST00000120125 642 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm12726-201ENSMUST00000121621 601 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm4996-201ENSMUST00000122042 784 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm23916-201ENSMUST00000158484 399 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Pabpn1-208ENSMUST00000172557 700 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm24103-201ENSMUST00000174930 77 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm25749-201ENSMUST00000175485 111 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm5435-201ENSMUST00000179295 1150 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm27383-201ENSMUST00000184418 361 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm29385-201ENSMUST00000186831 363 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm9127-201ENSMUST00000188041 985 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm37118-201ENSMUST00000194328 406 ntTSL 3 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 AC154552.4-201ENSMUST00000222171 151 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 AL662807.1-201ENSMUST00000224183 126 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Arhgef33-207ENSMUST00000224966 490 ntBASIC9.42□□□□□ -0.9
Trim35Q8C006 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Olfr152-202ENSMUST00000105210 2084 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Trim35Q8C006 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim35Q8C006 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms