Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm4525-201ENSMUST00000198831 254 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm45042-201ENSMUST00000207377 211 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Mir290a-201ENSMUST00000104627 83 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm13423-201ENSMUST00000117205 888 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm14865-201ENSMUST00000117523 494 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm11903-201ENSMUST00000118958 727 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm6451-201ENSMUST00000121488 717 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm25640-201ENSMUST00000175378 125 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm21301-201ENSMUST00000189476 699 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm2975-201ENSMUST00000209710 820 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm18907-201ENSMUST00000209719 932 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc40Q8BI79 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm14904-201ENSMUST00000117067 335 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm11858-201ENSMUST00000117935 838 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm26025-201ENSMUST00000158655 271 ntBASIC6.94□□□□□ -1.3
Ccdc40Q8BI79 Gm16112-201ENSMUST00000159075 382 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms