Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm15216-201ENSMUST00000118058 277 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm15621-201ENSMUST00000119162 364 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm12804-201ENSMUST00000121030 999 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm26023-201ENSMUST00000122722 313 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm16297-201ENSMUST00000161466 459 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm9064-201ENSMUST00000163579 566 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm9274-201ENSMUST00000182505 984 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm27804-201ENSMUST00000185135 119 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm38068-201ENSMUST00000192546 540 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 AC101205.1-201ENSMUST00000227916 907 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upf3bQ3ULL6 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm12229-201ENSMUST00000120487 468 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm14489-201ENSMUST00000120868 901 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm14212-201ENSMUST00000122023 826 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm3810-201ENSMUST00000122413 476 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm26381-201ENSMUST00000174895 92 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm5871-201ENSMUST00000176461 718 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm28941-201ENSMUST00000185536 1017 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm20128-201ENSMUST00000196189 417 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm8190-201ENSMUST00000199603 586 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm44856-201ENSMUST00000206639 304 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm5324-201ENSMUST00000208115 476 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm44892-201ENSMUST00000208595 488 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm45626-201ENSMUST00000210093 361 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm18586-201ENSMUST00000217265 518 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Upf3bQ3ULL6 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.02□□□□□ -1.28
Upf3bQ3ULL6 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.02□□□□□ -1.28
Upf3bQ3ULL6 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms