Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Gm42462-201ENSMUST00000196543 1363 ntBASIC5.8□□□□□ -1.48
Nkx3-1P97436 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nkx3-1P97436 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Rnu11-201ENSMUST00000104135 134 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm24888-201ENSMUST00000104387 130 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm11504-201ENSMUST00000120211 173 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm15618-201ENSMUST00000121610 452 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm15096-201ENSMUST00000121918 878 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm3810-201ENSMUST00000122413 476 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm4660-201ENSMUST00000131499 403 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm18006-201ENSMUST00000177411 662 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm26509-201ENSMUST00000180947 948 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm27152-201ENSMUST00000183828 99 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm27507-201ENSMUST00000184199 93 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm28996-201ENSMUST00000190316 721 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm43383-201ENSMUST00000195981 469 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm9240-201ENSMUST00000206527 742 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm5119-201ENSMUST00000215858 634 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm10205-201ENSMUST00000087431 234 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 AC161884.1-201ENSMUST00000225436 2174 ntBASIC5.79□□□□□ -1.48
Nkx3-1P97436 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nkx3-1P97436 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm13006-201ENSMUST00000118683 214 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm14580-201ENSMUST00000119122 718 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm14613-201ENSMUST00000122239 752 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm23426-201ENSMUST00000122483 318 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm12833-201ENSMUST00000136112 477 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm15501-202ENSMUST00000140687 625 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Nkx3-1P97436 Mir6911-201ENSMUST00000184241 69 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Gm27348-201ENSMUST00000184511 170 ntBASIC5.78□□□□□ -1.48
Nkx3-1P97436 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms