Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Brca1P48754 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC7.4□□□□□ -1.22
Brca1P48754 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 Gm14294-201ENSMUST00000119749 751 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 Gm23662-201ENSMUST00000158046 111 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 Gm8009-201ENSMUST00000191672 436 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Gm37358-201ENSMUST00000195492 479 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Gm31166-201ENSMUST00000209326 288 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.4□□□□□ -1.23
Brca1P48754 Gm8667-201ENSMUST00000211112 449 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.4□□□□□ -1.23
Brca1P48754 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC7.4□□□□□ -1.23
Brca1P48754 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.4□□□□□ -1.23
Brca1P48754 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 AC192333.6-201ENSMUST00000224565 725 ntBASIC7.4□□□□□ -1.23
Brca1P48754 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.4□□□□□ -1.23
Brca1P48754 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Brca1P48754 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Brca1P48754 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.4□□□□□ -1.23
Brca1P48754 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brca1P48754 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.4□□□□□ -1.23
Brca1P48754 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm37057-201ENSMUST00000192624 1916 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Brca1P48754 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm22261-201ENSMUST00000158691 324 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm3544-201ENSMUST00000196129 305 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.39□□□□□ -1.23
Brca1P48754 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm45874-201ENSMUST00000212423 346 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.39□□□□□ -1.23
Brca1P48754 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Brca1P48754 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Brca1P48754 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.39□□□□□ -1.23
Brca1P48754 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Brca1P48754 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brca1P48754 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Brca1P48754 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Brca1P48754 Gm13626-201ENSMUST00000119435 402 ntBASIC7.38□□□□□ -1.23
Brca1P48754 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.38□□□□□ -1.23
Brca1P48754 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.38□□□□□ -1.23
Brca1P48754 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.38□□□□□ -1.23
Brca1P48754 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Brca1P48754 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Brca1P48754 Gm5110-201ENSMUST00000203122 1063 ntBASIC7.38□□□□□ -1.23
Brca1P48754 Gm45473-201ENSMUST00000211452 616 ntBASIC7.38□□□□□ -1.23
Brca1P48754 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.38□□□□□ -1.23
Brca1P48754 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.38□□□□□ -1.23
Brca1P48754 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.38□□□□□ -1.23
Brca1P48754 Gm9088-201ENSMUST00000220237 508 ntBASIC7.38□□□□□ -1.23
Brca1P48754 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms