Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HttP42859 Gm22952-201ENSMUST00000116720 120 ntBASIC6.7□□□□□ -1.34
HttP42859 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.7□□□□□ -1.34
HttP42859 Gm27004-201ENSMUST00000183300 727 ntBASIC6.7□□□□□ -1.34
HttP42859 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.7□□□□□ -1.34
HttP42859 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.7□□□□□ -1.34
HttP42859 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HttP42859 Mir30b-201ENSMUST00000083542 96 ntBASIC6.7□□□□□ -1.34
HttP42859 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.69□□□□□ -1.34
HttP42859 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm37022-201ENSMUST00000192517 2254 ntBASIC6.69□□□□□ -1.34
HttP42859 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.69□□□□□ -1.34
HttP42859 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
HttP42859 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HttP42859 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.69□□□□□ -1.34
HttP42859 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HttP42859 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.69□□□□□ -1.34
HttP42859 Gm27972-201ENSMUST00000184720 137 ntBASIC6.69□□□□□ -1.34
HttP42859 Gm2053-201ENSMUST00000195671 631 ntBASIC6.69□□□□□ -1.34
HttP42859 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.69□□□□□ -1.34
HttP42859 Gm40692-201ENSMUST00000220411 491 ntBASIC6.69□□□□□ -1.34
HttP42859 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.69□□□□□ -1.34
HttP42859 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Gm11550-201ENSMUST00000118210 699 ntBASIC6.69□□□□□ -1.34
HttP42859 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.69□□□□□ -1.34
HttP42859 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.69□□□□□ -1.34
HttP42859 Gm27679-201ENSMUST00000184612 84 ntBASIC6.69□□□□□ -1.34
HttP42859 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HttP42859 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.69□□□□□ -1.34
HttP42859 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HttP42859 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC6.69□□□□□ -1.34
HttP42859 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HttP42859 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Gm22959-201ENSMUST00000122514 303 ntBASIC6.68□□□□□ -1.34
HttP42859 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.68□□□□□ -1.34
HttP42859 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Gm17981-201ENSMUST00000191109 739 ntBASIC6.68□□□□□ -1.34
HttP42859 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HttP42859 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.68□□□□□ -1.34
HttP42859 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HttP42859 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC6.68□□□□□ -1.34
HttP42859 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
HttP42859 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HttP42859 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HttP42859 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.68□□□□□ -1.34
HttP42859 Gm25427-201ENSMUST00000157605 103 ntBASIC6.68□□□□□ -1.34
HttP42859 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HttP42859 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Gm8506-201ENSMUST00000186661 829 ntBASIC6.68□□□□□ -1.34
HttP42859 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.68□□□□□ -1.34
HttP42859 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.68□□□□□ -1.34
HttP42859 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.68□□□□□ -1.34
HttP42859 Gm44132-201ENSMUST00000205142 151 ntBASIC6.68□□□□□ -1.34
HttP42859 Gm18587-201ENSMUST00000213736 841 ntBASIC6.68□□□□□ -1.34
HttP42859 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HttP42859 Gm23737-201ENSMUST00000082547 159 ntBASIC6.68□□□□□ -1.34
HttP42859 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms