Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm4764-201ENSMUST00000130207 1233 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm25013-201ENSMUST00000158402 128 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col18a1P39061 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm26923-201ENSMUST00000182615 996 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm3841-201ENSMUST00000191399 451 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm9237-201ENSMUST00000221499 548 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC8.74□□□□□ -1.01
Col18a1P39061 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col18a1P39061 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
Col18a1P39061 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Col18a1P39061 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.74□□□□□ -1.01
Col18a1P39061 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm8728-201ENSMUST00000207367 2178 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm8486-201ENSMUST00000207508 2171 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm8685-201ENSMUST00000207567 2183 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm16443-201ENSMUST00000207909 2184 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 Gm9923-201ENSMUST00000217785 1836 ntBASIC8.74□□□□□ -1.01
Col18a1P39061 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col18a1P39061 Gm24789-201ENSMUST00000104282 131 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm14601-201ENSMUST00000120892 236 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm24241-201ENSMUST00000157787 145 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Gm26372-201ENSMUST00000157831 236 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Gm22636-201ENSMUST00000158142 275 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col18a1P39061 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Gm44982-201ENSMUST00000208795 471 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC8.73□□□□□ -1.01
Col18a1P39061 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 AC163743.1-201ENSMUST00000224309 270 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 AC107711.2-203ENSMUST00000227827 762 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Mir375-201ENSMUST00000083682 64 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm23806-201ENSMUST00000175157 109 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Gm27225-201ENSMUST00000183833 557 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Col18a1P39061 Gm7768-201ENSMUST00000222988 597 ntBASIC8.73□□□□□ -1.01
Col18a1P39061 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col18a1P39061 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col18a1P39061 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms