Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm38299-201ENSMUST00000193214 3789 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col1a1P11087 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm11984-201ENSMUST00000118142 766 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Gm15616-201ENSMUST00000118662 375 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Gm14796-201ENSMUST00000121216 959 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm6631-201ENSMUST00000193699 559 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Gm43215-201ENSMUST00000199108 252 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col1a1P11087 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col1a1P11087 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col1a1P11087 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.7□□□□□ -1.18
Col1a1P11087 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col1a1P11087 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Col1a1P11087 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col1a1P11087 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col1a1P11087 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm8317-201ENSMUST00000121261 471 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm25459-201ENSMUST00000157953 114 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm23894-201ENSMUST00000158107 313 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm16139-201ENSMUST00000160015 420 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm9597-201ENSMUST00000171913 602 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm37689-201ENSMUST00000193139 275 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC7.69□□□□□ -1.18
Col1a1P11087 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.69□□□□□ -1.18
Col1a1P11087 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm9269-201ENSMUST00000221661 578 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm6776-201ENSMUST00000057752 900 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Col1a1P11087 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
Col1a1P11087 Gm26163-201ENSMUST00000083792 178 ntBASIC7.69□□□□□ -1.18
Col1a1P11087 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.69□□□□□ -1.18
Col1a1P11087 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col1a1P11087 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms