Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm6654-201ENSMUST00000118950 348 ntBASIC5.92□□□□□ -1.46
P06344 Gm11370-201ENSMUST00000120583 260 ntBASIC5.92□□□□□ -1.46
P06344 Gm7494-201ENSMUST00000121248 441 ntBASIC5.92□□□□□ -1.46
P06344 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.92□□□□□ -1.46
P06344 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
P06344 Gm18849-201ENSMUST00000189861 560 ntBASIC5.92□□□□□ -1.46
P06344 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.92□□□□□ -1.46
P06344 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.92□□□□□ -1.46
P06344 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.92□□□□□ -1.46
P06344 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Gm35619-201ENSMUST00000222548 600 ntBASIC5.92□□□□□ -1.46
P06344 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.92□□□□□ -1.46
P06344 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.92□□□□□ -1.46
P06344 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
P06344 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
P06344 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
P06344 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.92□□□□□ -1.46
P06344 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.92□□□□□ -1.46
P06344 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
P06344 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
P06344 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.92□□□□□ -1.46
P06344 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.92□□□□□ -1.46
P06344 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.91□□□□□ -1.46
P06344 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
P06344 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.91□□□□□ -1.46
P06344 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
P06344 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.91□□□□□ -1.46
P06344 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
P06344 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
P06344 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
P06344 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
P06344 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.91□□□□□ -1.46
P06344 Gm14614-201ENSMUST00000119873 384 ntBASIC5.91□□□□□ -1.46
P06344 Gm8215-201ENSMUST00000120627 990 ntBASIC5.91□□□□□ -1.46
P06344 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.91□□□□□ -1.46
P06344 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.91□□□□□ -1.46
P06344 Gm20432-201ENSMUST00000173716 250 ntBASIC5.91□□□□□ -1.46
P06344 Gm23968-201ENSMUST00000175047 125 ntBASIC5.91□□□□□ -1.46
P06344 Gm24155-201ENSMUST00000175259 110 ntBASIC5.91□□□□□ -1.46
P06344 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.91□□□□□ -1.46
P06344 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.91□□□□□ -1.46
P06344 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.91□□□□□ -1.46
P06344 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.91□□□□□ -1.46
P06344 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.91□□□□□ -1.46
P06344 Gm36448-201ENSMUST00000199916 438 ntBASIC5.91□□□□□ -1.46
P06344 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC5.91□□□□□ -1.46
P06344 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
P06344 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.91□□□□□ -1.46
P06344 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
P06344 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
P06344 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.91□□□□□ -1.46
P06344 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.91□□□□□ -1.46
P06344 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.91□□□□□ -1.46
P06344 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.91□□□□□ -1.46
P06344 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
P06344 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.91□□□□□ -1.46
P06344 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
P06344 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
P06344 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
P06344 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.91□□□□□ -1.46
P06344 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
P06344 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
P06344 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
P06344 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
P06344 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms