Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm12825-201ENSMUST00000120249 563 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm11407-201ENSMUST00000120362 1058 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm5809-201ENSMUST00000121854 529 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm23117-201ENSMUST00000158482 108 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm17377-201ENSMUST00000165184 207 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm17129-201ENSMUST00000168168 505 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm9149-201ENSMUST00000182724 1007 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm28952-201ENSMUST00000189285 681 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm28586-201ENSMUST00000189857 456 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm34583-203ENSMUST00000202586 454 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm16475-202ENSMUST00000209033 528 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm18562-201ENSMUST00000209949 915 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Olfr888-201ENSMUST00000075228 945 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm22053-201ENSMUST00000083394 200 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Fbxw23-202ENSMUST00000198480 1388 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm13858-201ENSMUST00000118862 671 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm15971-201ENSMUST00000119372 211 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm14796-201ENSMUST00000121216 959 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm24840-201ENSMUST00000122603 147 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm23276-201ENSMUST00000157913 138 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm22687-201ENSMUST00000158301 105 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm25839-201ENSMUST00000158921 103 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm7678-201ENSMUST00000181879 943 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm21542-201ENSMUST00000182307 993 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Gm8614-201ENSMUST00000182528 978 ntBASIC6.49□□□□□ -1.37
Pcdh1F7BJK1 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms