Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm5406-201ENSMUST00000120054 766 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm22492-201ENSMUST00000157192 297 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm8039-201ENSMUST00000204758 712 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a3E9PWQ3 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm23632-201ENSMUST00000175289 125 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm27034-201ENSMUST00000182552 940 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm27679-201ENSMUST00000184612 84 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm42584-201ENSMUST00000201404 220 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm23459-201ENSMUST00000083259 131 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm15877-201ENSMUST00000121897 964 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm22262-201ENSMUST00000158713 86 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Mir7658-201ENSMUST00000184043 57 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm42961-201ENSMUST00000202023 181 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Robo2-201ENSMUST00000116586 4764 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm37321-201ENSMUST00000195742 1872 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm16250-201ENSMUST00000148974 256 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Gm19936-201ENSMUST00000216414 838 ntBASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col6a3E9PWQ3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm16248-201ENSMUST00000124238 243 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col6a3E9PWQ3 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms