Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.2■□□□□ 0.5
H2afb2S4R1M3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
H2afb2S4R1M3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb2S4R1M3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm27405-201ENSMUST00000184201 112 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.18■□□□□ 0.5
H2afb2S4R1M3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb2S4R1M3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb2S4R1M3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb2S4R1M3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.14■□□□□ 0.5
H2afb2S4R1M3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
H2afb2S4R1M3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb2S4R1M3 Fst-202ENSMUST00000223640 2612 ntBASIC18.14■□□□□ 0.49
H2afb2S4R1M3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb2S4R1M3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb2S4R1M3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb2S4R1M3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
H2afb2S4R1M3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
H2afb2S4R1M3 Tgds-204ENSMUST00000228543 1594 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms