Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H2afb3S4R1G7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb3S4R1G7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.35■□□□□ 0.21
H2afb3S4R1G7 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb3S4R1G7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb3S4R1G7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
H2afb3S4R1G7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb3S4R1G7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.33■□□□□ 0.21
H2afb3S4R1G7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb3S4R1G7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
H2afb3S4R1G7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb3S4R1G7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb3S4R1G7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb3S4R1G7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms