Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Atp6v1c1Q9Z1G3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Spcs1-204ENSMUST00000226782 949 ntBASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6v1c1Q9Z1G3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6v1c1Q9Z1G3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6v1c1Q9Z1G3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6v1c1Q9Z1G3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6v1c1Q9Z1G3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
Atp6v1c1Q9Z1G3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atp6v1c1Q9Z1G3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atp6v1c1Q9Z1G3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6v1c1Q9Z1G3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Atp6v1c1Q9Z1G3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.76■□□□□ 0.43
Atp6v1c1Q9Z1G3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6v1c1Q9Z1G3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms