Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm37055-201ENSMUST00000191866 133 ntBASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Nr1h3Q9Z0Y9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nr1h3Q9Z0Y9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 BC021767-201ENSMUST00000126387 1716 ntBASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nr1h3Q9Z0Y9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.7■□□□□ 0.74
Nr1h3Q9Z0Y9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1h3Q9Z0Y9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm15565-201ENSMUST00000118890 427 ntBASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1h3Q9Z0Y9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nr1h3Q9Z0Y9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms