Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip2Q9Z0H8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip2Q9Z0H8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip2Q9Z0H8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.13■□□□□ 0.97
Clip2Q9Z0H8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Gm38285-201ENSMUST00000192928 922 ntBASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip2Q9Z0H8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip2Q9Z0H8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.1■□□□□ 0.97
Clip2Q9Z0H8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip2Q9Z0H8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Gm10698-201ENSMUST00000182663 604 ntBASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clip2Q9Z0H8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Clip2Q9Z0H8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clip2Q9Z0H8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clip2Q9Z0H8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms