Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm43137-201ENSMUST00000198052 594 ntBASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm8969-201ENSMUST00000199694 526 ntBASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cx3cr1Q9Z0D9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cx3cr1Q9Z0D9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm12251-201ENSMUST00000117893 792 ntBASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cx3cr1Q9Z0D9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Smad6-203ENSMUST00000179458 273 ntBASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms