Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.82■□□□□ 0.44
Atp6ap1Q9R1Q9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atp6ap1Q9R1Q9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.8■□□□□ 0.44
Atp6ap1Q9R1Q9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.79■□□□□ 0.44
Atp6ap1Q9R1Q9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atp6ap1Q9R1Q9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atp6ap1Q9R1Q9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.77■□□□□ 0.43
Atp6ap1Q9R1Q9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atp6ap1Q9R1Q9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.76■□□□□ 0.43
Atp6ap1Q9R1Q9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms