Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Gm12933-201ENSMUST00000120203 872 ntBASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Gm6365-201ENSMUST00000054711 744 ntBASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Grk6-206ENSMUST00000224995 2971 ntBASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Gm43213-201ENSMUST00000151866 1790 ntBASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40aQ9R1C7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40aQ9R1C7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf40aQ9R1C7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40aQ9R1C7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf40aQ9R1C7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40aQ9R1C7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms