Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd2Q9R1A8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd2Q9R1A8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd2Q9R1A8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.73■□□□□ 0.59
Rfwd2Q9R1A8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.73■□□□□ 0.59
Rfwd2Q9R1A8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfwd2Q9R1A8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rfwd2Q9R1A8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Rfwd2Q9R1A8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rfwd2Q9R1A8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfwd2Q9R1A8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Rfwd2Q9R1A8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfwd2Q9R1A8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfwd2Q9R1A8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms