Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a4Q9QZR9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Gm27389-201ENSMUST00000183622 195 ntBASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 AW822252-206ENSMUST00000208904 237 ntBASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Gm21559-201ENSMUST00000220638 855 ntBASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Gm8587-201ENSMUST00000076538 843 ntBASIC18.41■□□□□ 0.54
Col4a4Q9QZR9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a4Q9QZR9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a4Q9QZR9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col4a4Q9QZR9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a4Q9QZR9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.4■□□□□ 0.54
Col4a4Q9QZR9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col4a4Q9QZR9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col4a4Q9QZR9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col4a4Q9QZR9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col4a4Q9QZR9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Gm34391-201ENSMUST00000203706 907 ntBASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Gm5867-201ENSMUST00000063197 592 ntBASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a4Q9QZR9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col4a4Q9QZR9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Gm18958-201ENSMUST00000174258 762 ntBASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.36■□□□□ 0.53
Col4a4Q9QZR9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a4Q9QZR9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a4Q9QZR9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a4Q9QZR9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a4Q9QZR9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Col4a4Q9QZR9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms