Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shroom3Q9QXN0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.27■□□□□ 0.51
Shroom3Q9QXN0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Fst-202ENSMUST00000223640 2612 ntBASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shroom3Q9QXN0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shroom3Q9QXN0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Gm2399-201ENSMUST00000104944 225 ntBASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shroom3Q9QXN0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shroom3Q9QXN0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.22■□□□□ 0.51
Shroom3Q9QXN0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Dio3-201ENSMUST00000097228 1449 ntBASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shroom3Q9QXN0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Shroom3Q9QXN0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Shroom3Q9QXN0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Shroom3Q9QXN0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.2■□□□□ 0.5
Shroom3Q9QXN0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms