Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpsf3Q9QXK7 Flg-201ENSMUST00000050758 1488 ntBASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpsf3Q9QXK7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf3Q9QXK7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf3Q9QXK7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.59■□□□□ 0.73
Cpsf3Q9QXK7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf3Q9QXK7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf3Q9QXK7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpsf3Q9QXK7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf3Q9QXK7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpsf3Q9QXK7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Cpsf3Q9QXK7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cpsf3Q9QXK7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 Zfp783-201ENSMUST00000095946 670 ntBASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cpsf3Q9QXK7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpsf3Q9QXK7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpsf3Q9QXK7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpsf3Q9QXK7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Gm38285-201ENSMUST00000192928 922 ntBASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpsf3Q9QXK7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf3Q9QXK7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf3Q9QXK7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf3Q9QXK7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf3Q9QXK7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms