Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn5aQ9JJV9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn5aQ9JJV9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Gm6345-202ENSMUST00000180900 204 ntBASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn5aQ9JJV9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Gm10013-201ENSMUST00000106074 672 ntBASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn5aQ9JJV9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn5aQ9JJV9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn5aQ9JJV9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn5aQ9JJV9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Scn5aQ9JJV9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Scn5aQ9JJV9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn5aQ9JJV9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Scn5aQ9JJV9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn5aQ9JJV9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.83■□□□□ 0.6
Scn5aQ9JJV9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn5aQ9JJV9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms