Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rbfox1Q9JJ43 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rbfox1Q9JJ43 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbfox1Q9JJ43 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rbfox1Q9JJ43 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbfox1Q9JJ43 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rbfox1Q9JJ43 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.5■□□□□ 0.07
Rbfox1Q9JJ43 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Rbfox1Q9JJ43 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Tgds-204ENSMUST00000228543 1594 ntBASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rbfox1Q9JJ43 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rbfox1Q9JJ43 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rbfox1Q9JJ43 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rbfox1Q9JJ43 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rbfox1Q9JJ43 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rbfox1Q9JJ43 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Rbfox1Q9JJ43 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rbfox1Q9JJ43 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms