Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1fQ9JIS7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1fQ9JIS7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Gm10418-201ENSMUST00000100943 576 ntBASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1fQ9JIS7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1fQ9JIS7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Gm23634-201ENSMUST00000175071 91 ntBASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1fQ9JIS7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1fQ9JIS7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Gm7367-201ENSMUST00000057611 492 ntBASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cacna1fQ9JIS7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cacna1fQ9JIS7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Gm27463-201ENSMUST00000183569 57 ntBASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Gm45058-201ENSMUST00000205810 766 ntBASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.76■□□□□ 0.91
Cacna1fQ9JIS7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1fQ9JIS7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Gm6345-202ENSMUST00000180900 204 ntBASIC20.74■□□□□ 0.91
Cacna1fQ9JIS7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms